| Soil Microbiology andSustainable Crop Production | 3 |
|---|
| Preface | 5 |
| Contents | 9 |
| Contributors | 11 |
| Chapter 1: The Nature of Sustainable Agriculture | 15 |
| Introduction | 15 |
| Recent Challenges in the Global Foodscape | 17 |
| Land Degradation and It Impact on Sustainability | 19 |
| Chemical Degradation | 21 |
| Amelioration of Charge Degradation | 26 |
| Addressing Soil Physical Degradation | 32 |
| Transforming the Agricultural Landscape | 35 |
| References | 36 |
| Chapter 2: The Microbiology of Natural Soils | 40 |
| Introduction | 40 |
| Methods of Study | 41 |
| Soil as a Habitat | 42 |
| Survey of Ecosystems | 43 |
| Tropical Forests | 44 |
| Neotropics: Amazonia, Costa Rica, Hawaii | 45 |
| Conclusions: Neotropics | 54 |
| Tropics of Africa, Southeast Asia, and Oceania | 54 |
| Conclusions: Old World Tropics | 59 |
| Wetlands | 60 |
| Soil Microbial Communities and Changing Agricultural Management Regimes | 62 |
| Conclusion | 64 |
| References | 65 |
| Chapter 3: Soil Microbiology and Nutrient Cycling | 71 |
| Introduction | 71 |
| The Global Biogeochemical Cycle of Carbon | 75 |
| Organic Matter in Soils and Its Turnover | 75 |
| Factors Controlling Decomposition | 78 |
| Substrate Quality | 79 |
| Organisms | 80 |
| Environmental Conditions | 81 |
| The Biogeochemical Cycle of Nitrogen | 83 |
| Nitrogen Mineralization | 83 |
| Nitrogen Fixation | 85 |
| Denitrification | 87 |
| Nitrification | 88 |
| Microbial Contributions to Phosphorus Cycling in Soil | 89 |
| Concluding Remarks | 89 |
| References | 90 |
| Chapter 4: The Role of Microbial Communities in the Formation and Decomposition of Soil Organic Matter | 93 |
| Introduction | 93 |
| Importance of Soil Microbial Community Composition and Diversity | 99 |
| Interactions Between Microorganisms and Soil Fauna | 106 |
| Impacts of Nutrient Inputs on Microbial Mineralisation | 110 |
| Microorganism-Nutrient Relationships | 111 |
| Mechanisms for Nutrient Effect on the Decomposition of Soil Organic Matter | 111 |
| Effects of Nutrient Addition on Decomposition of Soil Organic Matter Components | 113 |
| Microbial Origin of Soil Organic Matter | 115 |
| References | 120 |
| Chapter 5: Intimate Associations of Beneficial Soil Microbes with Host Plants | 131 |
| Introduction | 131 |
| Mycorrhizas | 133 |
| The Main Types of Mycorrhizas | 133 |
| Arbuscular Mycorrhiza (AM) | 135 |
| Ectomycorrhiza (ECM) | 137 |
| Orchid Mycorrhiza | 137 |
| Ericoid Mycorrhiza | 137 |
| Arbuscular Mycorrhiza (AM): Development and Function | 138 |
| Cycle of AM Development | 138 |
| Improvement of Plant Phosphorus Uptake by AM Fungi | 142 |
| Increase of Plant Drought Tolerance | 143 |
| Increase of Plant Resistance to Pathogens | 144 |
| Bacterial Endosymbionts of Mycorrhizal Fungi | 145 |
| Legume-Rhizobia Root-Nodule (RN) Symbiosis | 146 |
| Specificity of RN Symbiosis | 146 |
| Development and Functioning of RN | 149 |
| Developmental Genetics of RN and AM Symbioses | 154 |
| Developmental Genetics of RN Symbiosis | 156 |
| Plant Genes Implicated in AM Development | 157 |
| The Use of Model Legumes for Studying Molecular Genetics of Symbioses | 160 |
| General Scheme of Functioning of the Common Symbiosis Pathway | 161 |
| Plant Receptors Involved in Nodule Formation | 164 |
| Cytokinin Signalling and Reception in Legumes | 167 |
| Autoregulation of RN and AM Symbioses Development | 168 |
| Associations of Roots with Plant Growth-Promoting Rhizobacteria (PGPR) | 169 |
| Nutritional Associations | 170 |
| Defensive Associations | 171 |
| Mutually Beneficial Associations of Plants with Endophytic Bacteria | 175 |
| Synergism of the Beneficial Soil Microbes in the Rhizosphere | 177 |
| Adaptive Evolution of the Mutually Beneficial Plant–Microbe Symbioses | 178 |
| New Approaches of Application of Mutually Beneficial Plant–Microbe Systems in Sustainable Agriculture | 183 |
| Development of New Types of Microbial Inocula | 184 |
| Legumes in Sustainable Agriculture | 185 |
| Legume Breeding to Improve Their Symbiotic Effectiveness | 185 |
| Analysis of Genetic Variability of Pea with Respect to its Effectiveness of Interactions with Beneficial Soil Microbes | 186 |
| Breeding to Improve Pea Symbiotic Effectiveness | 187 |
| Conclusions | 187 |
| References | 188 |
| Chapter 6: Soil-Borne Pathogens and Their Interactions with the Soil Environment | 209 |
| Introduction | 209 |
| The Impact of Soil-Borne Pathogens on Crops | 211 |
| Quantifying Losses | 212 |
| Evaluating Losses | 215 |
| Mitigation by Manipulating Husbandry | 219 |
| Rotation | 219 |
| Soil Type | 222 |
| Primary Cultivation: Tillage3 | 225 |
| Secondary Cultivation | 227 |
| Soil Acidity and Alkalinity (Hydrogen Ion Content, pH) | 229 |
| Nutrient Status | 232 |
| Water Management | 239 |
| Sowing and Planting Times | 242 |
| Soil Solarisation | 243 |
| Cover, Trap and Biofumigation Cropping | 245 |
| Organic Additives | 247
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