| Dedication | 6 |
|---|
| Table of Contents | 8 |
|---|
| Introduction to Red Algae in the Genomic Age | 12 |
|---|
| Foreword | 16 |
|---|
| Acknowledgments | 20 |
|---|
| List of Authors for “Red Algae in Genomic Age” | 22 |
|---|
| Part 1:ORIGIN AND EVOLUTION | 30 |
|---|
| THE CHLOROPLAST DIVISION MACHINERY: ORIGIN AND EVOLUTION | 32 |
| EVOLUTIONARY HISTORY AND TAXONOMY OF RED ALGAE | 54 |
| Part 2: GENERAL STUDIESOF RHODOPHYTA | 70 |
|---|
| INVASIVE AND ALIEN RHODOPHYTA IN THE MEDITERRANEAN AND ALONG THE ISRAELI SHORES | 73 |
| THE EXTREME ENVIRONMENTS OF PORPHYRA, A FAST GROWING AND EDIBLE RED MARINE MACROALGA | 88 |
| INVESTIGATIONS ON REPRODUCTIVE AFFINITIES IN RED ALGAE | 102 |
| TAXONOMIC REVISIONS OF FRESHWATER RHODOPHYTA IN RECENT YEARS | 134 |
| Part 3: GENOMIC STUDIESAND BIOTECHNOLOGY | 147 |
|---|
| PORPHYRA: COMPLEX LIFE HISTORIES IN A HARSH ENVIRONMENT: P. UMBILICALIS, AN INTERTIDAL RED ALGA FOR GENOMIC ANALYSIS | 150 |
| UTILIZING RED ALGAE TO UNDERSTAND A NEURODEGENERATIVE DISEASE | 170 |
| COORDINATION OF NUCLEAR AND PLASTID GENE EXPRESSION IN RED ALGAE AND GREEN PLANTS | 190 |
| PLASTID EVOLUTION AND THE NUCLEAR GENOMIC “FOOTPRINT” OF RED AND GREEN ALGAL ENDOSYMBIONTS | 209 |
| RED MICROALGAE: FROM BASIC KNOW-HOW TO BIOTECHNOLOGY | 222 |
| RED ALGAL GENOMICS: A SYNOPSIS | 242 |
| BANGIOPHYTES: FROM ONE CLASS TO SIX | WHERE DO WE GO FROM HERE?256 |
| GENOMIC CONTRIBUTIONS TO UNDERSTANDING THE EVOLUTION OF RED ALGAL PLASTIDS AND PIGMENT BIOSYNTHESIS | 275 |
| HOW HAVE GENOME STUDIES IMPROVED OUR UNDERSTANDING OF ORGANELLE EVOLUTION AND METABOLISM IN RED ALGAE? | 287 |
| COMPUTATIONAL GENE PREDICTION IN EUKARYOTIC GENOMES | 302 |
| DEVELOPMENTS IN BIOTECHNOLOGY OF RED ALGAE | 318 |
| Part 4:CYANIDIA | 351 |
|---|
| OVERVIEW ON CYANIDIAN BIOLOGY | 353 |
| THE CYANIDIALES: ECOLOGY, BIODIVERSITY, AND BIOGEOGRAPHY | 365 |
| MECHANISMS OF ACIDO-TOLERANCE AND CHARACTERISTICS OF PHOTOSYSTEMS IN AN ACIDOPHILIC AND THERMOPHILIC RED ALGA, Cyanidium caldarium | 380 |
| REDOX-MODIFICATION OF CHLOROPLAST ENZYMESIN GALDIERIA SULPHURARIA: TRIAL-AND-ERROR IN EVOLUTION OR PERFECT ADAPTATION TO EXTREME CONDITIONS? | 396 |
| THE THERMO-ACIDOPHILIC CYANIDIOPHYCEAE (CYANIDIALES) | 412 |
| CHILEAN CAVE CYANIDIUM | 430 |
| Part 5:BIOCHEMISTRY AND PHYSIOLOGY | 441 |
|---|
| LOW MOLECULAR WEIGHT CARBOHYDRATES IN RED ALGAE – AN ECOPHYSIOLOGICAL AND BIOCHEMICAL PERSPECTIVE | 443 |
| RED ALGAL DEFENSES IN THE GENOMICS AGE | 456 |
| Part 6: CONCLUSION AND SUMMARY | 475 |
|---|
| Summary, Final Comments and Conclusions | 476 |
| Organism Index | 479 |
|---|
| Subject Index | 481 |
|---|
| Author Index | 490 |